CDS

Accession Number TCMCG057C15376
gbkey CDS
Protein Id XP_018477803.1
Location join(2909207..2909265,2909417..2909490,2909707..2909780,2909852..2909961,2910045..2910136,2910224..2910336,2910437..2910556,2910624..2910769,2910848..2910961,2911063..2911131,2911234..2911360)
Gene LOC108848848
GeneID 108848848
Organism Raphanus sativus

Protein

Length 365aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018622301.1
Definition PREDICTED: autophagy-related protein 18b isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description WD40 repeats
KEGG_TC 9.A.15.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17908        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0000422        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006497        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032266        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034045        [VIEW IN EMBL-EBI]
GO:0034497        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042157        [VIEW IN EMBL-EBI]
GO:0042158        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0061726        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080025        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901981        [VIEW IN EMBL-EBI]
GO:1902936        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAATCAGTCGTCTCCATCTTCTATCTACTGTGCATCTTTCAATCAAGATAACAGTGGGTTCGCGATAAGTTCGAGAGATTCCTTCAAAATATTCGATTCCACTACAGGCAGACTCTGTTATGAACGAGCTGCTGGAGCTTTTGTTATTGTTGAGATGTTGTATAGCTCTGATCTACTTGCACTTGTTGGAGCTGGTGAGCAGGCTTCTCTATCTCCAAGGCGACTCTGCTTATTCAATACCACAAGGGGTTCTCCTCTTAAAGAACTGAATTTTTTGACTTCTATACTTGCTGTCCGTATGAACAAGAAACGGCTTGTTGTTGTGCTGGTGGAGAAAACATTCGTTTACGACTTGAATACGCTTGTTATGCTTGATACTATCGACACCGTGCCAAATCCAAAAGGTCTCTGTGCGTTCTCTCCAAGTCTTGAAGGCTGCTTCTTAGCTGTTCCGGCTAGTACAACCAAAGGAGCTGTTTTGGTGTATAACGTCATTGATTTGCAGTCTCACAGTGAGATTGATGCACATCGTTCTCCATTGGCTGCAATCGCACTCTCTTCAAATGGAATGTATATTGCTACAGCATCTGAGCAAGGAACTCTGATCCGAGTCCATCTTGTTTCTGAATCAACTAAGTCATATAGTTTCAGGAGAGGAACATACCCATCAACAATATACTCACTCTCTTTTGGACCATCCACACAGCTACCGGATATATTGATTGCGACGAGTTCTTCAGGCTCCATCCATGCCTTCTCTTTAATGTTGGCCATAAACCAAAGAAGCAAAAGGTCTACTAGCTTTCTTGGATCAGTTCTTCCAGACAGCGTGAGTGATGCACTAGACCCAGCGCATCACCACGTGCTTCAAAATGCGGTTTCTTCCGGAATTAGAAGTTATGCAGTGGTTAGGAAGATAGAGAAACTTGAAGGAACATCATCTCCATCTCAGTTTACATCTATTAGGGCGACTGTATCAGTGATTACATATAGTGGGTATTTCCAGGAGTATACGTTGAGTATCAATAGCAAGAATGAATCGTTATGGACACTGGAACGTGAGTTCAACCTCTACCCCGTAATCAGCAGTTGA
Protein:  
MANQSSPSSIYCASFNQDNSGFAISSRDSFKIFDSTTGRLCYERAAGAFVIVEMLYSSDLLALVGAGEQASLSPRRLCLFNTTRGSPLKELNFLTSILAVRMNKKRLVVVLVEKTFVYDLNTLVMLDTIDTVPNPKGLCAFSPSLEGCFLAVPASTTKGAVLVYNVIDLQSHSEIDAHRSPLAAIALSSNGMYIATASEQGTLIRVHLVSESTKSYSFRRGTYPSTIYSLSFGPSTQLPDILIATSSSGSIHAFSLMLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSGIRSYAVVRKIEKLEGTSSPSQFTSIRATVSVITYSGYFQEYTLSINSKNESLWTLEREFNLYPVISS